Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC3P51654 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GPC3P51654 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC3P51654 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC3P51654 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
GPC3P51654 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.46■□□□□ 0.39
GPC3P51654 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 AC007950.2-201ENST00000615045 2347 ntBASIC17.46■□□□□ 0.39
GPC3P51654 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
GPC3P51654 AC136604.1-201ENST00000418535 575 ntBASIC17.46■□□□□ 0.39
GPC3P51654 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC3P51654 KRT18P64-201ENST00000434946 1219 ntBASIC17.46■□□□□ 0.39
GPC3P51654 U91328.1-201ENST00000437528 223 ntBASIC17.46■□□□□ 0.39
GPC3P51654 AC244107.1-201ENST00000442033 332 ntBASIC17.46■□□□□ 0.39
GPC3P51654 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.46■□□□□ 0.39
GPC3P51654 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC3P51654 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 AC011495.1-201ENST00000498085 584 ntBASIC17.46■□□□□ 0.39
GPC3P51654 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.46■□□□□ 0.39
GPC3P51654 TMEM261P1-201ENST00000604899 340 ntBASIC17.46■□□□□ 0.39
GPC3P51654 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
GPC3P51654 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.46■□□□□ 0.39
GPC3P51654 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GPC3P51654 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.46■□□□□ 0.38
GPC3P51654 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC3P51654 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
GPC3P51654 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC3P51654 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC3P51654 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
GPC3P51654 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
GPC3P51654 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
GPC3P51654 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.45■□□□□ 0.38
GPC3P51654 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GPC3P51654 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC3P51654 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.45■□□□□ 0.38
GPC3P51654 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC3P51654 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.45■□□□□ 0.38
GPC3P51654 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.45■□□□□ 0.38
GPC3P51654 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC3P51654 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.45■□□□□ 0.38
GPC3P51654 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
GPC3P51654 WFDC1-204ENST00000613603 549 ntBASIC17.45■□□□□ 0.38
GPC3P51654 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
GPC3P51654 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC3P51654 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.45■□□□□ 0.38
GPC3P51654 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
GPC3P51654 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC3P51654 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.45■□□□□ 0.38
GPC3P51654 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
GPC3P51654 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GPC3P51654 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
GPC3P51654 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC3P51654 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GPC3P51654 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 CLK3P2-201ENST00000427566 1453 ntBASIC17.44■□□□□ 0.38
GPC3P51654 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
GPC3P51654 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
GPC3P51654 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
GPC3P51654 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.44■□□□□ 0.38
GPC3P51654 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 OR8S1-201ENST00000310194 1080 ntBASIC17.44■□□□□ 0.38
GPC3P51654 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC3P51654 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
GPC3P51654 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms