Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 AC099063.4-201ENST00000641099 1602 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 AC006058.4-201ENST00000624016 1670 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF144AP50876 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF144AP50876 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RNF144AP50876 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF144AP50876 HLA-H-201ENST00000383620 1096 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF144AP50876 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 CNN2P11-201ENST00000429351 262 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF144AP50876 AC004967.1-201ENST00000453589 447 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 ALG1L8P-201ENST00000533887 760 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF144AP50876 RARRES2P9-201ENST00000565168 469 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.81□□□□□ -0.04
RNF144AP50876 RN7SL275P-201ENST00000582762 335 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
RNF144AP50876 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF144AP50876 AC027612.4-201ENST00000605371 583 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 AC003101.2-201ENST00000612557 442 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 AC023511.2-201ENST00000618803 211 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF144AP50876 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF144AP50876 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF144AP50876 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RNF144AP50876 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF144AP50876 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF144AP50876 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF144AP50876 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 BNIP3P1-202ENST00000550043 1585 ntBASIC14.81□□□□□ -0.04
RNF144AP50876 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF144AP50876 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF144AP50876 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RNF144AP50876 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
RNF144AP50876 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF144AP50876 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF144AP50876 GPS2P2-201ENST00000430745 888 ntBASIC14.8□□□□□ -0.04
RNF144AP50876 DNAJB3-202ENST00000449667 1266 ntBASIC14.8□□□□□ -0.04
RNF144AP50876 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF144AP50876 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF144AP50876 KRT8P23-201ENST00000560090 1207 ntBASIC14.8□□□□□ -0.04
RNF144AP50876 SNHG9-202ENST00000564014 471 ntBASIC14.8□□□□□ -0.04
RNF144AP50876 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF144AP50876 RN7SL371P-201ENST00000578099 267 ntBASIC14.8□□□□□ -0.04
RNF144AP50876 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF144AP50876 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.8□□□□□ -0.04
RNF144AP50876 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF144AP50876 AC004835.2-201ENST00000603762 682 ntBASIC14.8□□□□□ -0.04
RNF144AP50876 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.8□□□□□ -0.04
RNF144AP50876 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RNF144AP50876 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RNF144AP50876 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RNF144AP50876 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF144AP50876 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
RNF144AP50876 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
RNF144AP50876 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF144AP50876 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF144AP50876 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF144AP50876 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms