Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCKBRP32239 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCKBRP32239 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCKBRP32239 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCKBRP32239 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCKBRP32239 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
CCKBRP32239 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.22■□□□□ 0.03
CCKBRP32239 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.22■□□□□ 0.03
CCKBRP32239 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCKBRP32239 BRI3BPP1-201ENST00000594224 787 ntBASIC15.22■□□□□ 0.03
CCKBRP32239 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.22■□□□□ 0.03
CCKBRP32239 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCKBRP32239 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCKBRP32239 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCKBRP32239 AC018665.1-201ENST00000622927 1362 ntBASIC15.22■□□□□ 0.03
CCKBRP32239 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCKBRP32239 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCKBRP32239 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CCKBRP32239 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCKBRP32239 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.21■□□□□ 0.03
CCKBRP32239 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.21■□□□□ 0.03
CCKBRP32239 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CCKBRP32239 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.21■□□□□ 0.03
CCKBRP32239 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.21■□□□□ 0.03
CCKBRP32239 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCKBRP32239 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 AC068587.6-202ENST00000641839 5619 ntBASIC15.21■□□□□ 0.03
CCKBRP32239 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCKBRP32239 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CCKBRP32239 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.21■□□□□ 0.03
CCKBRP32239 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.21■□□□□ 0.03
CCKBRP32239 ACTG1P3-201ENST00000431775 1114 ntBASIC15.21■□□□□ 0.03
CCKBRP32239 TARDBPP1-201ENST00000442013 1203 ntBASIC15.21■□□□□ 0.03
CCKBRP32239 CROCCP4-201ENST00000457096 498 ntBASIC15.21■□□□□ 0.03
CCKBRP32239 FAM86LP-201ENST00000478302 853 ntBASIC15.21■□□□□ 0.03
CCKBRP32239 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.21■□□□□ 0.03
CCKBRP32239 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.21■□□□□ 0.03
CCKBRP32239 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCKBRP32239 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.21■□□□□ 0.03
CCKBRP32239 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.21■□□□□ 0.03
CCKBRP32239 CU634019.7-201ENST00000624153 1185 ntBASIC15.21■□□□□ 0.03
CCKBRP32239 FP236241.2-201ENST00000624906 1185 ntBASIC15.21■□□□□ 0.03
CCKBRP32239 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCKBRP32239 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.21■□□□□ 0.03
CCKBRP32239 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCKBRP32239 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCKBRP32239 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.21■□□□□ 0.02
CCKBRP32239 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCKBRP32239 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CCKBRP32239 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CCKBRP32239 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.21■□□□□ 0.02
CCKBRP32239 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
CCKBRP32239 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CCKBRP32239 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCKBRP32239 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCKBRP32239 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.2■□□□□ 0.02
CCKBRP32239 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.2■□□□□ 0.02
CCKBRP32239 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCKBRP32239 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CCKBRP32239 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCKBRP32239 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.2■□□□□ 0.02
CCKBRP32239 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCKBRP32239 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCKBRP32239 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCKBRP32239 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCKBRP32239 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.2■□□□□ 0.02
CCKBRP32239 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCKBRP32239 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCKBRP32239 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCKBRP32239 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.2■□□□□ 0.02
CCKBRP32239 TOMM22P5-201ENST00000416399 439 ntBASIC15.2■□□□□ 0.02
CCKBRP32239 AC074338.1-201ENST00000416825 156 ntBASIC15.2■□□□□ 0.02
CCKBRP32239 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.2■□□□□ 0.02
CCKBRP32239 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.2■□□□□ 0.02
CCKBRP32239 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.2■□□□□ 0.02
CCKBRP32239 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.2■□□□□ 0.02
CCKBRP32239 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CCKBRP32239 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCKBRP32239 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms