Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM21P19474 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM21P19474 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM21P19474 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM21P19474 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM21P19474 UXT-AS1-201ENST00000590504 1525 ntBASIC17.56■□□□□ 0.4
TRIM21P19474 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM21P19474 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM21P19474 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TRIM21P19474 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM21P19474 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM21P19474 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM21P19474 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM21P19474 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM21P19474 AP001282.1-201ENST00000531301 1499 ntBASIC17.56■□□□□ 0.4
TRIM21P19474 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM21P19474 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
TRIM21P19474 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM21P19474 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM21P19474 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM21P19474 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM21P19474 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM21P19474 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM21P19474 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM21P19474 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM21P19474 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM21P19474 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM21P19474 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM21P19474 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM21P19474 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM21P19474 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM21P19474 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
TRIM21P19474 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM21P19474 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM21P19474 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM21P19474 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM21P19474 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.55■□□□□ 0.4
TRIM21P19474 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM21P19474 AC027307.2-201ENST00000591252 911 ntBASIC17.55■□□□□ 0.4
TRIM21P19474 AC022145.2-201ENST00000598203 171 ntBASIC17.55■□□□□ 0.4
TRIM21P19474 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM21P19474 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
TRIM21P19474 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM21P19474 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM21P19474 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM21P19474 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 AC134407.2-201ENST00000625089 1978 ntBASIC17.55■□□□□ 0.4
TRIM21P19474 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 AL513477.1-201ENST00000602865 2407 ntBASIC17.55■□□□□ 0.4
TRIM21P19474 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM21P19474 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM21P19474 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM21P19474 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM21P19474 AC087481.3-201ENST00000602886 1894 ntBASIC17.54■□□□□ 0.4
TRIM21P19474 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRIM21P19474 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM21P19474 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM21P19474 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM21P19474 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM21P19474 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM21P19474 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM21P19474 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM21P19474 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM21P19474 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM21P19474 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM21P19474 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM21P19474 KRT18P32-201ENST00000424695 1287 ntBASIC17.54■□□□□ 0.4
TRIM21P19474 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM21P19474 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM21P19474 DNAJB3-202ENST00000449667 1266 ntBASIC17.54■□□□□ 0.4
TRIM21P19474 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM21P19474 KRT8P48-201ENST00000515599 1220 ntBASIC17.54■□□□□ 0.4
TRIM21P19474 AC243562.1-201ENST00000560672 389 ntBASIC17.54■□□□□ 0.4
TRIM21P19474 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRIM21P19474 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM21P19474 AL596442.2-201ENST00000610240 980 ntBASIC17.54■□□□□ 0.4
TRIM21P19474 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM21P19474 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM21P19474 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM21P19474 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms