Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.49□□□□□ -0.09
CD53P19397 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CD53P19397 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.49□□□□□ -0.09
CD53P19397 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CD53P19397 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CD53P19397 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD53P19397 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.49□□□□□ -0.09
CD53P19397 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.49□□□□□ -0.09
CD53P19397 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CD53P19397 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.48□□□□□ -0.09
CD53P19397 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CD53P19397 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.48□□□□□ -0.09
CD53P19397 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.48□□□□□ -0.09
CD53P19397 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.48□□□□□ -0.09
CD53P19397 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.48□□□□□ -0.09
CD53P19397 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.48□□□□□ -0.09
CD53P19397 SPCS2P4-201ENST00000436160 681 ntBASIC14.48□□□□□ -0.09
CD53P19397 UGT1A2P-201ENST00000454886 866 ntBASIC14.48□□□□□ -0.09
CD53P19397 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.48□□□□□ -0.09
CD53P19397 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.48□□□□□ -0.09
CD53P19397 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.48□□□□□ -0.09
CD53P19397 MIR4515-201ENST00000584082 81 ntBASIC14.48□□□□□ -0.09
CD53P19397 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.48□□□□□ -0.09
CD53P19397 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.48□□□□□ -0.09
CD53P19397 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.48□□□□□ -0.09
CD53P19397 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.48□□□□□ -0.09
CD53P19397 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.48□□□□□ -0.09
CD53P19397 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CD53P19397 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.48□□□□□ -0.09
CD53P19397 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CD53P19397 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CD53P19397 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.48□□□□□ -0.09
CD53P19397 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD53P19397 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CD53P19397 FO538757.1-201ENST00000623083 1397 ntBASIC14.47□□□□□ -0.09
CD53P19397 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.47□□□□□ -0.09
CD53P19397 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.47□□□□□ -0.09
CD53P19397 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.47□□□□□ -0.09
CD53P19397 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.47□□□□□ -0.09
CD53P19397 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 FAM207CP-201ENST00000443486 507 ntBASIC14.47□□□□□ -0.09
CD53P19397 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.47□□□□□ -0.09
CD53P19397 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 AC140878.1-201ENST00000565277 250 ntBASIC14.47□□□□□ -0.09
CD53P19397 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.47□□□□□ -0.09
CD53P19397 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.47□□□□□ -0.09
CD53P19397 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms