Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 SSR4P1-203ENST00000599569 2260 ntBASIC14.24□□□□□ -0.13
HLA-DOBP13765 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DOBP13765 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 SPDYE7P-202ENST00000420373 878 ntBASIC14.23□□□□□ -0.13
HLA-DOBP13765 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.23□□□□□ -0.13
HLA-DOBP13765 PHKG1P2-201ENST00000457537 863 ntBASIC14.23□□□□□ -0.13
HLA-DOBP13765 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 AC069262.1-201ENST00000539058 672 ntBASIC14.23□□□□□ -0.13
HLA-DOBP13765 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 AC013268.4-201ENST00000637413 2228 ntBASIC14.23□□□□□ -0.13
HLA-DOBP13765 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DOBP13765 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DOBP13765 PPT1-215ENST00000641471 2368 ntBASIC14.23□□□□□ -0.13
HLA-DOBP13765 AC020658.6-201ENST00000623564 1870 ntBASIC14.23□□□□□ -0.13
HLA-DOBP13765 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.22□□□□□ -0.13
HLA-DOBP13765 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.22□□□□□ -0.13
HLA-DOBP13765 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 TSPY26P-202ENST00000565928 3884 ntBASIC14.22□□□□□ -0.13
HLA-DOBP13765 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 Z92544.3-201ENST00000624747 417 ntBASIC14.22□□□□□ -0.13
HLA-DOBP13765 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 AC105250.1-201ENST00000509378 2057 ntBASIC14.22□□□□□ -0.13
HLA-DOBP13765 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms