Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 SPDYE11-202ENST00000450699 704 ntBASIC17.22■□□□□ 0.35
CCDC172P0C7W6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 KRT8P23-201ENST00000560090 1207 ntBASIC17.22■□□□□ 0.35
CCDC172P0C7W6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 SPDYE9P-201ENST00000570642 692 ntBASIC17.22■□□□□ 0.35
CCDC172P0C7W6 SPDYE10P-202ENST00000612005 668 ntBASIC17.22■□□□□ 0.35
CCDC172P0C7W6 SPDYE8P-202ENST00000612377 668 ntBASIC17.22■□□□□ 0.35
CCDC172P0C7W6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 AC087481.3-201ENST00000602886 1894 ntBASIC17.22■□□□□ 0.35
CCDC172P0C7W6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 HLA-H-201ENST00000383620 1096 ntBASIC17.21■□□□□ 0.35
CCDC172P0C7W6 AC142381.1-201ENST00000426099 345 ntBASIC17.21■□□□□ 0.35
CCDC172P0C7W6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 IGHV3-62-201ENST00000520057 340 ntBASIC17.21■□□□□ 0.35
CCDC172P0C7W6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 AC026120.1-201ENST00000611536 926 ntBASIC17.21■□□□□ 0.35
CCDC172P0C7W6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC172P0C7W6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.21■□□□□ 0.34
CCDC172P0C7W6 SSR4P1-203ENST00000599569 2260 ntBASIC17.21■□□□□ 0.34
CCDC172P0C7W6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
CCDC172P0C7W6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC172P0C7W6 AC026979.3-201ENST00000607315 403 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms