Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 AC007389.4-201ENST00000454674 793 ntBASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 AL033527.5-201ENST00000641382 801 ntBASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 CLK3P2-201ENST00000427566 1453 ntBASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40ALP0C0E4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 ME2P1-201ENST00000426028 1970 ntBASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 HAUS4P1-201ENST00000406739 1145 ntBASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 TARDBPP1-201ENST00000442013 1203 ntBASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 KRT17P8-201ENST00000540749 863 ntBASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 AC017083.2-201ENST00000608069 979 ntBASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB40ALP0C0E4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms