Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.05■□□□□ 0.64
APPP05067 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
APPP05067 AC112504.1-201ENST00000623415 1841 ntBASIC19.05■□□□□ 0.64
APPP05067 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 EEF1DP4-201ENST00000446006 880 ntBASIC19.05■□□□□ 0.64
APPP05067 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.05■□□□□ 0.64
APPP05067 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 SDHAP3-202ENST00000515467 728 ntBASIC19.05■□□□□ 0.64
APPP05067 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.05■□□□□ 0.64
APPP05067 AC135586.1-201ENST00000539323 574 ntBASIC19.05■□□□□ 0.64
APPP05067 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.05■□□□□ 0.64
APPP05067 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
APPP05067 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.05■□□□□ 0.64
APPP05067 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.05■□□□□ 0.64
APPP05067 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.05■□□□□ 0.64
APPP05067 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
APPP05067 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.05■□□□□ 0.64
APPP05067 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.05■□□□□ 0.64
APPP05067 HYMAI-201ENST00000635591 3347 ntBASIC19.05■□□□□ 0.64
APPP05067 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.05■□□□□ 0.64
APPP05067 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.05■□□□□ 0.64
APPP05067 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APPP05067 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.04■□□□□ 0.64
APPP05067 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
APPP05067 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.04■□□□□ 0.64
APPP05067 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 AC236430.1-201ENST00000402231 743 ntBASIC19.04■□□□□ 0.64
APPP05067 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.04■□□□□ 0.64
APPP05067 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.04■□□□□ 0.64
APPP05067 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.04■□□□□ 0.64
APPP05067 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.04■□□□□ 0.64
APPP05067 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.04■□□□□ 0.64
APPP05067 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.04■□□□□ 0.64
APPP05067 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.04■□□□□ 0.64
APPP05067 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.04■□□□□ 0.64
APPP05067 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
APPP05067 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
APPP05067 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.04■□□□□ 0.64
APPP05067 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.04■□□□□ 0.64
APPP05067 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.04■□□□□ 0.64
APPP05067 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
APPP05067 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APPP05067 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.04■□□□□ 0.64
APPP05067 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APPP05067 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.03■□□□□ 0.64
APPP05067 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
APPP05067 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APPP05067 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APPP05067 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
APPP05067 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
APPP05067 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APPP05067 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
APPP05067 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APPP05067 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
APPP05067 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APPP05067 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
APPP05067 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
APPP05067 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.03■□□□□ 0.64
APPP05067 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APPP05067 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
APPP05067 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
APPP05067 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.03■□□□□ 0.64
APPP05067 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
APPP05067 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
APPP05067 RN7SL204P-201ENST00000582831 262 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms