Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.51□□□□□ -0.25
CD3DP04234 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.51□□□□□ -0.25
CD3DP04234 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
CD3DP04234 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CD3DP04234 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.51□□□□□ -0.25
CD3DP04234 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CD3DP04234 AC140479.7-201ENST00000636301 2332 ntBASIC13.51□□□□□ -0.25
CD3DP04234 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CD3DP04234 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.51□□□□□ -0.25
CD3DP04234 AC127383.1-201ENST00000444697 1800 ntBASIC13.51□□□□□ -0.25
CD3DP04234 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CD3DP04234 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.51□□□□□ -0.25
CD3DP04234 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.51□□□□□ -0.25
CD3DP04234 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 AL031055.1-201ENST00000606362 631 ntBASIC13.51□□□□□ -0.25
CD3DP04234 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.51□□□□□ -0.25
CD3DP04234 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.51□□□□□ -0.25
CD3DP04234 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CD3DP04234 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.51□□□□□ -0.25
CD3DP04234 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CD3DP04234 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
CD3DP04234 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.51□□□□□ -0.25
CD3DP04234 AC018892.3-201ENST00000623986 2499 ntBASIC13.51□□□□□ -0.25
CD3DP04234 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CD3DP04234 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CD3DP04234 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD3DP04234 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CD3DP04234 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CD3DP04234 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.5□□□□□ -0.25
CD3DP04234 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CD3DP04234 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.5□□□□□ -0.25
CD3DP04234 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.5□□□□□ -0.25
CD3DP04234 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.5□□□□□ -0.25
CD3DP04234 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.5□□□□□ -0.25
CD3DP04234 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.5□□□□□ -0.25
CD3DP04234 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
CD3DP04234 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.5□□□□□ -0.25
CD3DP04234 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.5□□□□□ -0.25
CD3DP04234 MIR4515-201ENST00000584082 81 ntBASIC13.5□□□□□ -0.25
CD3DP04234 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.5□□□□□ -0.25
CD3DP04234 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
CD3DP04234 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CD3DP04234 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.5□□□□□ -0.25
CD3DP04234 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.5□□□□□ -0.25
CD3DP04234 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.5□□□□□ -0.25
CD3DP04234 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.5□□□□□ -0.25
CD3DP04234 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
CD3DP04234 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD3DP04234 AC041040.2-201ENST00000622926 2899 ntBASIC13.5□□□□□ -0.25
CD3DP04234 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD3DP04234 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD3DP04234 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD3DP04234 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD3DP04234 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms