Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
IFNA1P01562 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
IFNA1P01562 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
IFNA1P01562 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 SPDYE21P-201ENST00000413323 827 ntBASIC12.61□□□□□ -0.39
IFNA1P01562 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.61□□□□□ -0.39
IFNA1P01562 AL158047.1-201ENST00000445918 881 ntBASIC12.61□□□□□ -0.39
IFNA1P01562 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.61□□□□□ -0.39
IFNA1P01562 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.61□□□□□ -0.39
IFNA1P01562 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.61□□□□□ -0.39
IFNA1P01562 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.61□□□□□ -0.39
IFNA1P01562 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
IFNA1P01562 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.61□□□□□ -0.39
IFNA1P01562 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 ITM2C-210ENST00000620962 501 ntBASIC12.61□□□□□ -0.39
IFNA1P01562 AC010947.1-201ENST00000623454 693 ntBASIC12.61□□□□□ -0.39
IFNA1P01562 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
IFNA1P01562 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
IFNA1P01562 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 AC015656.1-201ENST00000624209 3578 ntBASIC12.61□□□□□ -0.39
IFNA1P01562 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
IFNA1P01562 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
IFNA1P01562 AC092127.1-201ENST00000567093 3455 ntBASIC12.61□□□□□ -0.39
IFNA1P01562 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
IFNA1P01562 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.61□□□□□ -0.39
IFNA1P01562 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IFNA1P01562 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
IFNA1P01562 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.6□□□□□ -0.39
IFNA1P01562 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
IFNA1P01562 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.6□□□□□ -0.39
IFNA1P01562 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 CYP2D8P-201ENST00000433633 1490 ntBASIC12.6□□□□□ -0.39
IFNA1P01562 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.6□□□□□ -0.39
IFNA1P01562 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.6□□□□□ -0.39
IFNA1P01562 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
IFNA1P01562 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.6□□□□□ -0.39
IFNA1P01562 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
IFNA1P01562 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.6□□□□□ -0.39
IFNA1P01562 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 VENTXP7-201ENST00000475503 772 ntBASIC12.6□□□□□ -0.39
IFNA1P01562 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.6□□□□□ -0.39
IFNA1P01562 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.6□□□□□ -0.39
IFNA1P01562 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IFNA1P01562 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.6□□□□□ -0.39
IFNA1P01562 AC087641.1-201ENST00000557561 1021 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms