Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.34□□□□□ -0.27
SIX6O95475 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SIX6O95475 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.34□□□□□ -0.27
SIX6O95475 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 AC136759.1-202ENST00000530858 2194 ntBASIC13.34□□□□□ -0.27
SIX6O95475 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SIX6O95475 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SIX6O95475 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.33□□□□□ -0.27
SIX6O95475 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SIX6O95475 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SIX6O95475 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SIX6O95475 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.33□□□□□ -0.27
SIX6O95475 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 Z82170.1-201ENST00000625081 3192 ntBASIC13.33□□□□□ -0.28
SIX6O95475 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SIX6O95475 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.33□□□□□ -0.28
SIX6O95475 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 AC112907.2-201ENST00000448639 330 ntBASIC13.33□□□□□ -0.28
SIX6O95475 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.33□□□□□ -0.28
SIX6O95475 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.33□□□□□ -0.28
SIX6O95475 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.33□□□□□ -0.28
SIX6O95475 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
SIX6O95475 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 BEND3P1-201ENST00000421591 1944 ntBASIC13.33□□□□□ -0.28
SIX6O95475 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.33□□□□□ -0.28
SIX6O95475 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SIX6O95475 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SIX6O95475 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SIX6O95475 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SIX6O95475 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.32□□□□□ -0.28
SIX6O95475 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 AC099521.3-201ENST00000624251 2938 ntBASIC13.32□□□□□ -0.28
SIX6O95475 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.32□□□□□ -0.28
SIX6O95475 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SIX6O95475 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SIX6O95475 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.32□□□□□ -0.28
SIX6O95475 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.32□□□□□ -0.28
SIX6O95475 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SIX6O95475 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms