Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HCN1O60741 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.92□□□□□ -0.02
HCN1O60741 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.92□□□□□ -0.02
HCN1O60741 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HCN1O60741 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
HCN1O60741 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HCN1O60741 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HCN1O60741 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HCN1O60741 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HCN1O60741 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HCN1O60741 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HCN1O60741 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HCN1O60741 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.92□□□□□ -0.02
HCN1O60741 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HCN1O60741 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HCN1O60741 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 AL365209.1-201ENST00000624418 6473 ntBASIC14.91□□□□□ -0.02
HCN1O60741 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HCN1O60741 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HCN1O60741 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.91□□□□□ -0.02
HCN1O60741 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
HCN1O60741 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.91□□□□□ -0.02
HCN1O60741 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 AC008677.1-201ENST00000519230 1561 ntBASIC14.91□□□□□ -0.02
HCN1O60741 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.91□□□□□ -0.02
HCN1O60741 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HCN1O60741 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HCN1O60741 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.91□□□□□ -0.02
HCN1O60741 FAM8A3P-201ENST00000427218 844 ntBASIC14.91□□□□□ -0.02
HCN1O60741 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.91□□□□□ -0.02
HCN1O60741 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.91□□□□□ -0.02
HCN1O60741 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.91□□□□□ -0.02
HCN1O60741 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.91□□□□□ -0.02
HCN1O60741 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.91□□□□□ -0.02
HCN1O60741 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.91□□□□□ -0.02
HCN1O60741 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.91□□□□□ -0.02
HCN1O60741 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HCN1O60741 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HCN1O60741 CDC14C-201ENST00000428251 1719 ntBASIC14.91□□□□□ -0.02
HCN1O60741 AC005622.1-201ENST00000636801 1703 ntBASIC14.91□□□□□ -0.02
HCN1O60741 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.91□□□□□ -0.02
HCN1O60741 AL592424.1-201ENST00000563624 1536 ntBASIC14.91□□□□□ -0.02
HCN1O60741 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
HCN1O60741 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HCN1O60741 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.91□□□□□ -0.02
HCN1O60741 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HCN1O60741 LINC02447-202ENST00000501888 2146 ntBASIC14.9□□□□□ -0.02
HCN1O60741 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
HCN1O60741 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HCN1O60741 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HCN1O60741 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HCN1O60741 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HCN1O60741 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HCN1O60741 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HCN1O60741 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HCN1O60741 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.9□□□□□ -0.02
HCN1O60741 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HCN1O60741 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HCN1O60741 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HCN1O60741 MIR943-201ENST00000401286 94 ntBASIC14.9□□□□□ -0.02
HCN1O60741 BASP1P1-201ENST00000430708 665 ntBASIC14.9□□□□□ -0.02
HCN1O60741 AC055876.3-201ENST00000431496 288 ntBASIC14.9□□□□□ -0.02
HCN1O60741 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.9□□□□□ -0.02
HCN1O60741 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HCN1O60741 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.9□□□□□ -0.02
HCN1O60741 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.9□□□□□ -0.02
HCN1O60741 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.9□□□□□ -0.02
HCN1O60741 DUX4L27-201ENST00000554796 1261 ntBASIC14.9□□□□□ -0.02
HCN1O60741 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HCN1O60741 RARRES2P9-201ENST00000565168 469 ntBASIC14.9□□□□□ -0.02
HCN1O60741 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.9□□□□□ -0.02
HCN1O60741 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HCN1O60741 AC005498.2-205ENST00000593218 784 ntBASIC14.9□□□□□ -0.02
HCN1O60741 AC138649.4-201ENST00000612222 287 ntBASIC14.9□□□□□ -0.02
HCN1O60741 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HCN1O60741 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HCN1O60741 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.9□□□□□ -0.02
HCN1O60741 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms