Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CTNND1O60716 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.42■□□□□ 0.54
CTNND1O60716 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTNND1O60716 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CTNND1O60716 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CTNND1O60716 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.42■□□□□ 0.54
CTNND1O60716 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTNND1O60716 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CTNND1O60716 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTNND1O60716 AL133267.1-201ENST00000398220 340 ntBASIC18.42■□□□□ 0.54
CTNND1O60716 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTNND1O60716 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CTNND1O60716 YBX1P6-201ENST00000442962 1002 ntBASIC18.42■□□□□ 0.54
CTNND1O60716 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CTNND1O60716 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.42■□□□□ 0.54
CTNND1O60716 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.42■□□□□ 0.54
CTNND1O60716 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.42■□□□□ 0.54
CTNND1O60716 AL606495.2-201ENST00000605867 535 ntBASIC18.42■□□□□ 0.54
CTNND1O60716 AC244669.2-201ENST00000612320 853 ntBASIC18.42■□□□□ 0.54
CTNND1O60716 GPR182-203ENST00000622922 591 ntBASIC18.42■□□□□ 0.54
CTNND1O60716 RHOXF1P1-202ENST00000635473 501 ntBASIC18.42■□□□□ 0.54
CTNND1O60716 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTNND1O60716 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTNND1O60716 AL133338.1-201ENST00000565695 1517 ntBASIC18.42■□□□□ 0.54
CTNND1O60716 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.42■□□□□ 0.54
CTNND1O60716 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTNND1O60716 KRT8P44-201ENST00000441609 1350 ntBASIC18.42■□□□□ 0.54
CTNND1O60716 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.41■□□□□ 0.54
CTNND1O60716 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.41■□□□□ 0.54
CTNND1O60716 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.41■□□□□ 0.54
CTNND1O60716 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.41■□□□□ 0.54
CTNND1O60716 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.41■□□□□ 0.54
CTNND1O60716 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.41■□□□□ 0.54
CTNND1O60716 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.41■□□□□ 0.54
CTNND1O60716 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CTNND1O60716 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CTNND1O60716 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.41■□□□□ 0.54
CTNND1O60716 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 MIR648-201ENST00000385046 94 ntBASIC18.41■□□□□ 0.54
CTNND1O60716 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.41■□□□□ 0.54
CTNND1O60716 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.41■□□□□ 0.54
CTNND1O60716 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 KRT90P-201ENST00000549264 1064 ntBASIC18.41■□□□□ 0.54
CTNND1O60716 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.41■□□□□ 0.54
CTNND1O60716 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CTNND1O60716 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CTNND1O60716 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.41■□□□□ 0.54
CTNND1O60716 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNND1O60716 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.4■□□□□ 0.54
CTNND1O60716 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.4■□□□□ 0.54
CTNND1O60716 AC018892.3-201ENST00000623986 2499 ntBASIC18.4■□□□□ 0.54
CTNND1O60716 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CTNND1O60716 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.4■□□□□ 0.54
CTNND1O60716 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CTNND1O60716 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.4■□□□□ 0.54
CTNND1O60716 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CTNND1O60716 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.4■□□□□ 0.54
CTNND1O60716 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 GNRHR2-203ENST00000581100 1187 ntBASIC18.4■□□□□ 0.54
CTNND1O60716 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CTNND1O60716 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.4■□□□□ 0.54
CTNND1O60716 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.4■□□□□ 0.54
CTNND1O60716 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CTNND1O60716 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 AC020907.1-201ENST00000616460 1350 ntBASIC18.4■□□□□ 0.54
CTNND1O60716 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms