Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.01□□□□□ -0.33
SSSCA1O60232 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
SSSCA1O60232 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.01□□□□□ -0.33
SSSCA1O60232 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.01□□□□□ -0.33
SSSCA1O60232 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.01□□□□□ -0.33
SSSCA1O60232 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.01□□□□□ -0.33
SSSCA1O60232 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.01□□□□□ -0.33
SSSCA1O60232 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.01□□□□□ -0.33
SSSCA1O60232 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.01□□□□□ -0.33
SSSCA1O60232 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
SSSCA1O60232 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.01□□□□□ -0.33
SSSCA1O60232 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SSSCA1O60232 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.01□□□□□ -0.33
SSSCA1O60232 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.01□□□□□ -0.33
SSSCA1O60232 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.01□□□□□ -0.33
SSSCA1O60232 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SSSCA1O60232 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SSSCA1O60232 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
SSSCA1O60232 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.01□□□□□ -0.33
SSSCA1O60232 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SSSCA1O60232 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSSCA1O60232 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
SSSCA1O60232 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 AC134407.2-201ENST00000625089 1978 ntBASIC13□□□□□ -0.33
SSSCA1O60232 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13□□□□□ -0.33
SSSCA1O60232 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13□□□□□ -0.33
SSSCA1O60232 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
SSSCA1O60232 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13□□□□□ -0.33
SSSCA1O60232 AP001282.1-201ENST00000531301 1499 ntBASIC13□□□□□ -0.33
SSSCA1O60232 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SSSCA1O60232 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13□□□□□ -0.33
SSSCA1O60232 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13□□□□□ -0.33
SSSCA1O60232 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 AC211429.1-201ENST00000415277 523 ntBASIC13□□□□□ -0.33
SSSCA1O60232 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13□□□□□ -0.33
SSSCA1O60232 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13□□□□□ -0.33
SSSCA1O60232 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13□□□□□ -0.33
SSSCA1O60232 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13□□□□□ -0.33
SSSCA1O60232 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13□□□□□ -0.33
SSSCA1O60232 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13□□□□□ -0.33
SSSCA1O60232 MIR3180-1-201ENST00000580374 94 ntBASIC13□□□□□ -0.33
SSSCA1O60232 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13□□□□□ -0.33
SSSCA1O60232 MIR3180-3-201ENST00000584616 94 ntBASIC13□□□□□ -0.33
SSSCA1O60232 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13□□□□□ -0.33
SSSCA1O60232 AL365330.1-201ENST00000607459 531 ntBASIC13□□□□□ -0.33
SSSCA1O60232 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13□□□□□ -0.33
SSSCA1O60232 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13□□□□□ -0.33
SSSCA1O60232 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13□□□□□ -0.33
SSSCA1O60232 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13□□□□□ -0.33
SSSCA1O60232 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SSSCA1O60232 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SSSCA1O60232 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SSSCA1O60232 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSSCA1O60232 GRK6P1-201ENST00000400595 1711 ntBASIC12.99□□□□□ -0.33
SSSCA1O60232 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SSSCA1O60232 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.99□□□□□ -0.33
SSSCA1O60232 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.99□□□□□ -0.33
SSSCA1O60232 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 MROH4P-201ENST00000431302 1578 ntBASIC12.99□□□□□ -0.33
SSSCA1O60232 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms