Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HOXA2O43364 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA2O43364 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA2O43364 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
HOXA2O43364 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA2O43364 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXA2O43364 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA2O43364 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.84■□□□□ 0.29
HOXA2O43364 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXA2O43364 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HOXA2O43364 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA2O43364 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXA2O43364 AC018892.3-201ENST00000623986 2499 ntBASIC16.84■□□□□ 0.29
HOXA2O43364 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOXA2O43364 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOXA2O43364 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HOXA2O43364 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOXA2O43364 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HOXA2O43364 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HOXA2O43364 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXA2O43364 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HOXA2O43364 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXA2O43364 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXA2O43364 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXA2O43364 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXA2O43364 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXA2O43364 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXA2O43364 GAPDHP40-201ENST00000505218 1006 ntBASIC16.83■□□□□ 0.28
HOXA2O43364 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HOXA2O43364 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXA2O43364 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
HOXA2O43364 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXA2O43364 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 AL133338.1-201ENST00000565695 1517 ntBASIC16.83■□□□□ 0.28
HOXA2O43364 AC025279.2-201ENST00000569730 653 ntBASIC16.83■□□□□ 0.28
HOXA2O43364 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXA2O43364 GNRHR2-203ENST00000581100 1187 ntBASIC16.83■□□□□ 0.28
HOXA2O43364 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXA2O43364 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 AC244669.2-201ENST00000612320 853 ntBASIC16.83■□□□□ 0.28
HOXA2O43364 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HOXA2O43364 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXA2O43364 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA2O43364 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXA2O43364 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA2O43364 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXA2O43364 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA2O43364 AGGF1P2-201ENST00000426656 2106 ntBASIC16.82■□□□□ 0.28
HOXA2O43364 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HOXA2O43364 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HOXA2O43364 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HOXA2O43364 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXA2O43364 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA2O43364 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 CNN2P8-201ENST00000421872 913 ntBASIC16.82■□□□□ 0.28
HOXA2O43364 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXA2O43364 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA2O43364 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA2O43364 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXA2O43364 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HOXA2O43364 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA2O43364 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA2O43364 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXA2O43364 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXA2O43364 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA2O43364 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA2O43364 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA2O43364 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA2O43364 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HOXA2O43364 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA2O43364 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXA2O43364 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms