Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.45■□□□□ 0.22
MSI1O43347 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.45■□□□□ 0.22
MSI1O43347 TPRX2P-201ENST00000535362 881 ntBASIC16.45■□□□□ 0.22
MSI1O43347 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
MSI1O43347 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.45■□□□□ 0.22
MSI1O43347 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MSI1O43347 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.45■□□□□ 0.22
MSI1O43347 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 HYMAI-201ENST00000635591 3347 ntBASIC16.45■□□□□ 0.22
MSI1O43347 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MSI1O43347 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.45■□□□□ 0.22
MSI1O43347 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MSI1O43347 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 AL365203.3-201ENST00000609742 2057 ntBASIC16.44■□□□□ 0.22
MSI1O43347 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MSI1O43347 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MSI1O43347 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 TIMM17BP1-201ENST00000545713 516 ntBASIC16.44■□□□□ 0.22
MSI1O43347 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
MSI1O43347 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.44■□□□□ 0.22
MSI1O43347 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.44■□□□□ 0.22
MSI1O43347 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
MSI1O43347 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
MSI1O43347 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.44■□□□□ 0.22
MSI1O43347 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MSI1O43347 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.44■□□□□ 0.22
MSI1O43347 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MSI1O43347 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.43■□□□□ 0.22
MSI1O43347 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.43■□□□□ 0.22
MSI1O43347 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MSI1O43347 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.43■□□□□ 0.22
MSI1O43347 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.43■□□□□ 0.22
MSI1O43347 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MSI1O43347 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.43■□□□□ 0.22
MSI1O43347 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
MSI1O43347 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
MSI1O43347 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.43■□□□□ 0.22
MSI1O43347 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.43■□□□□ 0.22
MSI1O43347 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
MSI1O43347 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.43■□□□□ 0.22
MSI1O43347 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.43■□□□□ 0.22
MSI1O43347 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.43■□□□□ 0.22
MSI1O43347 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.43■□□□□ 0.22
MSI1O43347 SLED1-202ENST00000512051 380 ntBASIC16.43■□□□□ 0.22
MSI1O43347 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.43■□□□□ 0.22
MSI1O43347 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.43■□□□□ 0.22
MSI1O43347 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
MSI1O43347 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.43■□□□□ 0.22
MSI1O43347 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms