Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 POM121L8P-201ENST00000417732 1281 ntBASIC16.25■□□□□ 0.19
TRANK1O15050 POM121L9P-203ENST00000441984 1285 ntBASIC16.25■□□□□ 0.19
TRANK1O15050 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.25■□□□□ 0.19
TRANK1O15050 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRANK1O15050 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRANK1O15050 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRANK1O15050 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRANK1O15050 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRANK1O15050 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.24■□□□□ 0.19
TRANK1O15050 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 EIF3FP3-201ENST00000434851 1086 ntBASIC16.24■□□□□ 0.19
TRANK1O15050 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.24■□□□□ 0.19
TRANK1O15050 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 INE2-201ENST00000630399 1874 ntBASIC16.24■□□□□ 0.19
TRANK1O15050 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.24■□□□□ 0.19
TRANK1O15050 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRANK1O15050 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRANK1O15050 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 RPL17P45-201ENST00000586289 509 ntBASIC16.24■□□□□ 0.19
TRANK1O15050 AC007881.3-201ENST00000608897 607 ntBASIC16.24■□□□□ 0.19
TRANK1O15050 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRANK1O15050 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRANK1O15050 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRANK1O15050 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.23■□□□□ 0.19
TRANK1O15050 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.23■□□□□ 0.19
TRANK1O15050 MIR4754-201ENST00000582477 89 ntBASIC16.23■□□□□ 0.19
TRANK1O15050 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRANK1O15050 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.23■□□□□ 0.19
TRANK1O15050 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TRANK1O15050 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRANK1O15050 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRANK1O15050 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.23■□□□□ 0.19
TRANK1O15050 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRANK1O15050 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TRANK1O15050 AC005324.6-201ENST00000587972 613 ntBASIC16.23■□□□□ 0.19
TRANK1O15050 AC011477.6-201ENST00000604980 1927 ntBASIC16.23■□□□□ 0.19
TRANK1O15050 FLJ38576-201ENST00000623820 2459 ntBASIC16.23■□□□□ 0.19
TRANK1O15050 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRANK1O15050 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRANK1O15050 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRANK1O15050 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.23■□□□□ 0.19
TRANK1O15050 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.23■□□□□ 0.19
TRANK1O15050 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRANK1O15050 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRANK1O15050 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRANK1O15050 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRANK1O15050 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRANK1O15050 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.22■□□□□ 0.19
TRANK1O15050 AC104073.2-201ENST00000453737 312 ntBASIC16.22■□□□□ 0.19
TRANK1O15050 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRANK1O15050 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.22■□□□□ 0.19
TRANK1O15050 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.22■□□□□ 0.19
TRANK1O15050 AL132994.2-201ENST00000603120 687 ntBASIC16.22■□□□□ 0.19
TRANK1O15050 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.22■□□□□ 0.19
TRANK1O15050 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.22■□□□□ 0.19
TRANK1O15050 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRANK1O15050 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRANK1O15050 AC006449.6-201ENST00000612330 2296 ntBASIC16.22■□□□□ 0.19
TRANK1O15050 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.22■□□□□ 0.19
TRANK1O15050 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRANK1O15050 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRANK1O15050 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.22■□□□□ 0.19
TRANK1O15050 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRANK1O15050 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.22■□□□□ 0.19
TRANK1O15050 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.22■□□□□ 0.19
TRANK1O15050 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRANK1O15050 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.22■□□□□ 0.19
TRANK1O15050 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRANK1O15050 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.22■□□□□ 0.19
TRANK1O15050 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRANK1O15050 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.22■□□□□ 0.19
TRANK1O15050 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.22■□□□□ 0.19
TRANK1O15050 PGAM1P5-201ENST00000548011 764 ntBASIC16.22■□□□□ 0.19
TRANK1O15050 AC090164.2-201ENST00000611487 516 ntBASIC16.22■□□□□ 0.19
TRANK1O15050 AC006453.1-201ENST00000636037 1257 ntBASIC16.22■□□□□ 0.19
TRANK1O15050 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.22■□□□□ 0.19
TRANK1O15050 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.22■□□□□ 0.19
TRANK1O15050 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.22■□□□□ 0.19
TRANK1O15050 AC080080.1-201ENST00000625121 2420 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms