Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD2O14647 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD2O14647 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHD2O14647 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHD2O14647 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC21.45■■□□□ 1.02
CHD2O14647 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC21.45■■□□□ 1.02
CHD2O14647 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD2O14647 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
CHD2O14647 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD2O14647 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC21.45■■□□□ 1.02
CHD2O14647 AC021723.1-201ENST00000486306 515 ntBASIC21.45■■□□□ 1.02
CHD2O14647 MESTP3-201ENST00000503460 968 ntBASIC21.45■■□□□ 1.02
CHD2O14647 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC21.45■■□□□ 1.02
CHD2O14647 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC21.45■■□□□ 1.02
CHD2O14647 AC138894.2-201ENST00000602838 371 ntBASIC21.45■■□□□ 1.02
CHD2O14647 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.45■■□□□ 1.02
CHD2O14647 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC21.45■■□□□ 1.02
CHD2O14647 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD2O14647 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC21.45■■□□□ 1.02
CHD2O14647 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD2O14647 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHD2O14647 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CHD2O14647 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHD2O14647 RN7SKP214-201ENST00000364208 315 ntBASIC21.44■■□□□ 1.02
CHD2O14647 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHD2O14647 HLA-K-203ENST00000430151 1046 ntBASIC21.44■■□□□ 1.02
CHD2O14647 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC21.44■■□□□ 1.02
CHD2O14647 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC21.44■■□□□ 1.02
CHD2O14647 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC21.44■■□□□ 1.02
CHD2O14647 AC004923.1-202ENST00000642106 209 ntBASIC21.44■■□□□ 1.02
CHD2O14647 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHD2O14647 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHD2O14647 MVK-214ENST00000629016 1591 ntTSL 5 BASIC21.44■■□□□ 1.02
CHD2O14647 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHD2O14647 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHD2O14647 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC21.44■■□□□ 1.02
CHD2O14647 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CHD2O14647 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CHD2O14647 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHD2O14647 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC21.44■■□□□ 1.02
CHD2O14647 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHD2O14647 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC21.44■■□□□ 1.02
CHD2O14647 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHD2O14647 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CHD2O14647 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHD2O14647 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CHD2O14647 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CHD2O14647 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 RBM38-204ENST00000371219 760 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD2O14647 PFN2-205ENST00000461868 613 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD2O14647 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC21.43■■□□□ 1.02
CHD2O14647 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC21.43■■□□□ 1.02
CHD2O14647 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD2O14647 AL136295.7-201ENST00000619226 1200 ntBASIC21.43■■□□□ 1.02
CHD2O14647 AC051619.9-201ENST00000623237 597 ntBASIC21.43■■□□□ 1.02
CHD2O14647 AL162426.1-201ENST00000624141 743 ntBASIC21.43■■□□□ 1.02
CHD2O14647 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC21.43■■□□□ 1.02
CHD2O14647 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CHD2O14647 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CHD2O14647 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC21.43■■□□□ 1.02
CHD2O14647 AP000593.2-201ENST00000542775 1433 ntBASIC21.43■■□□□ 1.02
CHD2O14647 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
CHD2O14647 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
CHD2O14647 RCC2P8-201ENST00000502779 1035 ntBASIC21.43■■□□□ 1.02
CHD2O14647 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD2O14647 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD2O14647 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHD2O14647 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD2O14647 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 AC055811.4-201ENST00000624039 1754 ntBASIC21.42■■□□□ 1.02
CHD2O14647 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.42■■□□□ 1.02
CHD2O14647 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC21.42■■□□□ 1.02
CHD2O14647 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CHD2O14647 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CHD2O14647 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC21.42■■□□□ 1.02
CHD2O14647 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC21.42■■□□□ 1.02
CHD2O14647 STUB1-204ENST00000564370 875 ntTSL 2 BASIC21.42■■□□□ 1.02
CHD2O14647 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC21.42■■□□□ 1.02
CHD2O14647 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD2O14647 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms