Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
TMEM88BA6NKF7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TMEM88BA6NKF7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 AC067852.2-201ENST00000590513 2313 ntBASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 AL136309.1-201ENST00000403917 691 ntBASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 AC073150.1-201ENST00000450406 1084 ntBASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 AC005324.6-201ENST00000587972 613 ntBASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 AC138466.4-201ENST00000623965 852 ntBASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM88BA6NKF7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 ALG1L13P-202ENST00000519320 584 ntBASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 RN7SL596P-201ENST00000582123 288 ntBASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM88BA6NKF7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 POM121L8P-201ENST00000417732 1281 ntBASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 POM121L9P-203ENST00000441984 1285 ntBASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 DGAT2L7P-201ENST00000602462 744 ntBASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.06■□□□□ 0.48
TMEM88BA6NKF7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms