Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 SLC7A15P-201ENST00000424028 1363 ntBASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
FOXD3Q9UJU5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 ATP5G2P4-201ENST00000442175 420 ntBASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 GIMAP3P-201ENST00000495150 836 ntBASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 RRP7BP-205ENST00000566851 833 ntBASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 SRD5A3P1-201ENST00000603021 949 ntBASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
FOXD3Q9UJU5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 TPRX2P-201ENST00000535362 881 ntBASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 AC106886.1-201ENST00000568660 600 ntBASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 REXO1L1P-202ENST00000608646 1974 ntBASIC14.18□□□□□ -0.14
FOXD3Q9UJU5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms