Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC1Q9NTX5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 UGT1A2P-201ENST00000454886 866 ntBASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 INGX-202ENST00000489074 768 ntBASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC1Q9NTX5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ECHDC1Q9NTX5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
ECHDC1Q9NTX5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ECHDC1Q9NTX5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ECHDC1Q9NTX5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 AC090616.6-203ENST00000579186 1945 ntBASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 AC015922.1-201ENST00000421102 1152 ntBASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 FAM8A3P-201ENST00000427218 844 ntBASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 AC135586.1-201ENST00000539323 574 ntBASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC1Q9NTX5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 SPDYE18-201ENST00000510091 1050 ntBASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms