Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.9■□□□□ 0.3
CISHQ9NSE2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CISHQ9NSE2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CISHQ9NSE2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.89■□□□□ 0.3
CISHQ9NSE2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.89■□□□□ 0.3
CISHQ9NSE2 AC022144.1-201ENST00000602255 1580 ntBASIC16.89■□□□□ 0.3
CISHQ9NSE2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.89■□□□□ 0.3
CISHQ9NSE2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CISHQ9NSE2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.89■□□□□ 0.29
CISHQ9NSE2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CISHQ9NSE2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 MRPS18AP1-201ENST00000414458 589 ntBASIC16.88■□□□□ 0.29
CISHQ9NSE2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 LINC01115-203ENST00000606068 577 ntBASIC16.88■□□□□ 0.29
CISHQ9NSE2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 AC105250.1-201ENST00000509378 2057 ntBASIC16.88■□□□□ 0.29
CISHQ9NSE2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CISHQ9NSE2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CISHQ9NSE2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CISHQ9NSE2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CISHQ9NSE2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CISHQ9NSE2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CISHQ9NSE2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CISHQ9NSE2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CISHQ9NSE2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.87■□□□□ 0.29
CISHQ9NSE2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CISHQ9NSE2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CISHQ9NSE2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.87■□□□□ 0.29
CISHQ9NSE2 RPL13P2-201ENST00000440687 659 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms