Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
BRF2Q9HAW0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 AL512356.2-201ENST00000546955 174 ntBASIC15.17■□□□□ 0.02
BRF2Q9HAW0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRF2Q9HAW0 AC112693.3-201ENST00000624819 1983 ntBASIC15.16■□□□□ 0.02
BRF2Q9HAW0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 HIST3H2BA-201ENST00000436555 524 ntBASIC15.16■□□□□ 0.02
BRF2Q9HAW0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 AC092865.5-201ENST00000545435 363 ntBASIC15.16■□□□□ 0.02
BRF2Q9HAW0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 MIR6080-201ENST00000617359 66 ntBASIC15.16■□□□□ 0.02
BRF2Q9HAW0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 AC009090.5-201ENST00000624886 2285 ntBASIC15.16■□□□□ 0.02
BRF2Q9HAW0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRF2Q9HAW0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms