Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 CICP6-201ENST00000457191 2729 ntBASIC18.43■□□□□ 0.54
SH2D4AQ9H788 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 BOLA2P3-201ENST00000404566 256 ntBASIC18.43■□□□□ 0.54
SH2D4AQ9H788 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 TMEM14DP-201ENST00000422205 345 ntBASIC18.43■□□□□ 0.54
SH2D4AQ9H788 AC134915.1-201ENST00000426461 574 ntBASIC18.43■□□□□ 0.54
SH2D4AQ9H788 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 KRT43P-201ENST00000434019 910 ntBASIC18.43■□□□□ 0.54
SH2D4AQ9H788 KRT18P64-201ENST00000434946 1219 ntBASIC18.43■□□□□ 0.54
SH2D4AQ9H788 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 KRT18P43-201ENST00000469825 1281 ntBASIC18.43■□□□□ 0.54
SH2D4AQ9H788 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 ENPP7P5-201ENST00000541031 1031 ntBASIC18.43■□□□□ 0.54
SH2D4AQ9H788 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 AC097359.3-201ENST00000603982 1210 ntBASIC18.43■□□□□ 0.54
SH2D4AQ9H788 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.43■□□□□ 0.54
SH2D4AQ9H788 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.42■□□□□ 0.54
SH2D4AQ9H788 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 INTS4P2-202ENST00000614726 2019 ntBASIC18.42■□□□□ 0.54
SH2D4AQ9H788 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 AC007274.1-201ENST00000439805 662 ntBASIC18.42■□□□□ 0.54
SH2D4AQ9H788 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.42■□□□□ 0.54
SH2D4AQ9H788 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.42■□□□□ 0.54
SH2D4AQ9H788 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.42■□□□□ 0.54
SH2D4AQ9H788 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SH2D4AQ9H788 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms