Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 AC092127.1-201ENST00000567093 3455 ntBASIC12.93□□□□□ -0.34
NKX6-2Q9C056 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 AC006277.1-201ENST00000624348 1610 ntBASIC12.93□□□□□ -0.34
NKX6-2Q9C056 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.93□□□□□ -0.34
NKX6-2Q9C056 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.93□□□□□ -0.34
NKX6-2Q9C056 AC098590.1-201ENST00000468126 897 ntBASIC12.93□□□□□ -0.34
NKX6-2Q9C056 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 CES1P1-201ENST00000421606 1704 ntBASIC12.93□□□□□ -0.34
NKX6-2Q9C056 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NKX6-2Q9C056 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 AC090616.6-203ENST00000579186 1945 ntBASIC12.92□□□□□ -0.34
NKX6-2Q9C056 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 PRORSD1P-201ENST00000295112 541 ntBASIC12.92□□□□□ -0.34
NKX6-2Q9C056 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 TSPY7P-201ENST00000431358 1114 ntBASIC12.92□□□□□ -0.34
NKX6-2Q9C056 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 AL138831.2-201ENST00000606564 490 ntBASIC12.92□□□□□ -0.34
NKX6-2Q9C056 AL390719.2-201ENST00000606993 987 ntBASIC12.92□□□□□ -0.34
NKX6-2Q9C056 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.92□□□□□ -0.34
NKX6-2Q9C056 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NKX6-2Q9C056 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms