Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AC007950.2-201ENST00000615045 2347 ntBASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 AP001282.1-201ENST00000531301 1499 ntBASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 AL035633.1-201ENST00000406139 838 ntBASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 COX20P2-201ENST00000452636 358 ntBASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 SDHAP3-202ENST00000515467 728 ntBASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 AC044860.1-202ENST00000559481 777 ntBASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP3Q9BWW4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms