Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 AC092127.1-201ENST00000567093 3455 ntBASIC13.17□□□□□ -0.3
GAFA1Q96PS6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 SLED1-202ENST00000512051 380 ntBASIC13.17□□□□□ -0.3
GAFA1Q96PS6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 LINC01115-203ENST00000606068 577 ntBASIC13.17□□□□□ -0.3
GAFA1Q96PS6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.17□□□□□ -0.3
GAFA1Q96PS6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.16□□□□□ -0.3
GAFA1Q96PS6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 MRPS18AP1-201ENST00000414458 589 ntBASIC13.16□□□□□ -0.3
GAFA1Q96PS6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 AC114501.2-201ENST00000439631 535 ntBASIC13.16□□□□□ -0.3
GAFA1Q96PS6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 RNA5SP421-201ENST00000516864 134 ntBASIC13.16□□□□□ -0.3
GAFA1Q96PS6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms