Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 C18orf15-201ENST00000623680 2534 ntBASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 KRT8P44-201ENST00000441609 1350 ntBASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 AC126365.1-201ENST00000578585 1514 ntBASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 Z97205.2-201ENST00000564697 1639 ntBASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 SERBP1P3-201ENST00000459980 809 ntBASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 HLA-V-204ENST00000476601 1289 ntBASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 AC109322.1-201ENST00000524499 1264 ntBASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 AC015911.4-201ENST00000588022 1070 ntBASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 AC138035.3-201ENST00000622706 2791 ntBASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 AL033527.5-202ENST00000641632 1098 ntBASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 AC079781.4-201ENST00000641908 219 ntBASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM5Q96HC4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 AL139400.1-201ENST00000366220 510 ntBASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 RPL5P21-201ENST00000404620 815 ntBASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 RPL37AP1-201ENST00000412502 279 ntBASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms