Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SDHAP3-202ENST00000515467 728 ntBASIC13.95□□□□□ -0.18
TMEM54Q969K7 ZNF890P-202ENST00000530367 1156 ntBASIC13.95□□□□□ -0.18
TMEM54Q969K7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 AC136621.1-201ENST00000624017 2304 ntBASIC13.95□□□□□ -0.18
TMEM54Q969K7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.94□□□□□ -0.18
TMEM54Q969K7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 TSSK5P-201ENST00000423978 907 ntBASIC13.94□□□□□ -0.18
TMEM54Q969K7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC055876.3-201ENST00000431496 288 ntBASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC241585.1-201ENST00000433527 519 ntBASIC13.94□□□□□ -0.18
TMEM54Q969K7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.94□□□□□ -0.18
TMEM54Q969K7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 SLED1-202ENST00000512051 380 ntBASIC13.94□□□□□ -0.18
TMEM54Q969K7 IGHV3-42-201ENST00000520410 361 ntBASIC13.94□□□□□ -0.18
TMEM54Q969K7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC074044.1-201ENST00000609673 707 ntBASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC138649.4-201ENST00000612222 287 ntBASIC13.94□□□□□ -0.18
TMEM54Q969K7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC092384.3-202ENST00000564646 2873 ntBASIC13.94□□□□□ -0.18
TMEM54Q969K7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM54Q969K7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM54Q969K7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms