Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 AL365203.3-201ENST00000609742 2057 ntBASIC16.79■□□□□ 0.28
ATP2A3Q93084 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 AC068418.2-201ENST00000577309 3703 ntBASIC16.78■□□□□ 0.28
ATP2A3Q93084 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 GK-202ENST00000378941 458 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 AL132655.2-201ENST00000596276 594 ntBASIC16.78■□□□□ 0.28
ATP2A3Q93084 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.78■□□□□ 0.28
ATP2A3Q93084 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 GGT4P-201ENST00000623672 1708 ntBASIC16.78■□□□□ 0.28
ATP2A3Q93084 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 AC007541.1-201ENST00000570282 1469 ntBASIC16.78■□□□□ 0.28
ATP2A3Q93084 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A3Q93084 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A3Q93084 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 NME2P1-201ENST00000426182 414 ntBASIC16.77■□□□□ 0.28
ATP2A3Q93084 AL353779.1-201ENST00000434793 351 ntBASIC16.77■□□□□ 0.28
ATP2A3Q93084 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATP2A3Q93084 AC004840.1-201ENST00000636359 365 ntBASIC16.77■□□□□ 0.28
ATP2A3Q93084 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A3Q93084 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
ATP2A3Q93084 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.77■□□□□ 0.27
ATP2A3Q93084 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A3Q93084 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ATP2A3Q93084 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A3Q93084 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.77■□□□□ 0.27
ATP2A3Q93084 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A3Q93084 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A3Q93084 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A3Q93084 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A3Q93084 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A3Q93084 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms