Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC018529.1-201ENST00000613063 361 ntBASIC15.03■□□□□ -0
SIMC1Q8NDZ2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIMC1Q8NDZ2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 AP005117.1-202ENST00000581724 1908 ntBASIC15.02■□□□□ -0
SIMC1Q8NDZ2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 TSEN15P1-201ENST00000423257 515 ntBASIC15.02■□□□□ -0
SIMC1Q8NDZ2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 AC003101.2-201ENST00000612557 442 ntBASIC15.02■□□□□ -0
SIMC1Q8NDZ2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.02■□□□□ -0
SIMC1Q8NDZ2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.02□□□□□ -0.01
SIMC1Q8NDZ2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 KRT18P28-201ENST00000453838 1332 ntBASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 CICP4-201ENST00000447359 2812 ntBASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 MIR6080-201ENST00000617359 66 ntBASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 AP001059.3-201ENST00000619053 235 ntBASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 AC093028.1-201ENST00000622998 982 ntBASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms