Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 AF228730.5-201ENST00000530288 346 ntBASIC15.75■□□□□ 0.11
SNX31Q8N9S9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 SPDYE9P-201ENST00000570642 692 ntBASIC15.75■□□□□ 0.11
SNX31Q8N9S9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 SPDYE10P-202ENST00000612005 668 ntBASIC15.75■□□□□ 0.11
SNX31Q8N9S9 SPDYE8P-202ENST00000612377 668 ntBASIC15.75■□□□□ 0.11
SNX31Q8N9S9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.75■□□□□ 0.11
SNX31Q8N9S9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.74■□□□□ 0.11
SNX31Q8N9S9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 TIMM8BP1-201ENST00000452384 211 ntBASIC15.74■□□□□ 0.11
SNX31Q8N9S9 RN7SL589P-201ENST00000481268 310 ntBASIC15.74■□□□□ 0.11
SNX31Q8N9S9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 PGAM5P1-201ENST00000518923 814 ntBASIC15.74■□□□□ 0.11
SNX31Q8N9S9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 MIR4321-201ENST00000592276 80 ntBASIC15.74■□□□□ 0.11
SNX31Q8N9S9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 SPTSSB-204ENST00000617024 1292 ntBASIC15.74■□□□□ 0.11
SNX31Q8N9S9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 SSR4P1-203ENST00000599569 2260 ntBASIC15.74■□□□□ 0.11
SNX31Q8N9S9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
SNX31Q8N9S9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.73■□□□□ 0.11
SNX31Q8N9S9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 AC245100.5-201ENST00000452108 331 ntBASIC15.73■□□□□ 0.11
SNX31Q8N9S9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 AC098859.1-201ENST00000502915 1238 ntBASIC15.73■□□□□ 0.11
SNX31Q8N9S9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.73■□□□□ 0.11
SNX31Q8N9S9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms