Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 AC126177.1-201ENST00000547829 2218 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
LINC00311Q8N616 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00311Q8N616 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00311Q8N616 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.83□□□□□ -0.35
LINC00311Q8N616 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00311Q8N616 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00311Q8N616 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.83□□□□□ -0.35
LINC00311Q8N616 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.83□□□□□ -0.35
LINC00311Q8N616 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 AC074338.1-201ENST00000416825 156 ntBASIC12.83□□□□□ -0.36
LINC00311Q8N616 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 AC097493.3-201ENST00000509725 367 ntBASIC12.83□□□□□ -0.36
LINC00311Q8N616 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
LINC00311Q8N616 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00311Q8N616 CICP6-201ENST00000457191 2729 ntBASIC12.82□□□□□ -0.36
LINC00311Q8N616 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 GPALPP1-207ENST00000611650 899 ntBASIC12.82□□□□□ -0.36
LINC00311Q8N616 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms