Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF2Q8N5M1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 MIR943-201ENST00000401286 94 ntBASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 TREML5P-201ENST00000421694 576 ntBASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 AL645939.2-201ENST00000427340 991 ntBASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 HIST3H2BA-201ENST00000436555 524 ntBASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 MIR4313-201ENST00000580760 101 ntBASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 AL158211.3-201ENST00000607385 239 ntBASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 TEX28P1-201ENST00000613479 1221 ntBASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 AC106028.4-201ENST00000614509 607 ntBASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 TEX28P2-201ENST00000617764 1221 ntBASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 MIR6069-201ENST00000620069 79 ntBASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF2Q8N5M1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF2Q8N5M1 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.27■□□□□ 0.19
ATPAF2Q8N5M1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.27■□□□□ 0.19
ATPAF2Q8N5M1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF2Q8N5M1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.27■□□□□ 0.19
ATPAF2Q8N5M1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF2Q8N5M1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF2Q8N5M1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF2Q8N5M1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF2Q8N5M1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.27■□□□□ 0.19
ATPAF2Q8N5M1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.27■□□□□ 0.19
ATPAF2Q8N5M1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF2Q8N5M1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms