Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 AC136604.1-201ENST00000418535 575 ntBASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 HIST3H2BA-201ENST00000436555 524 ntBASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 AC092127.1-201ENST00000567093 3455 ntBASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 AL513477.1-201ENST00000602865 2407 ntBASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC65Q8IXS2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 AC125807.1-201ENST00000483097 614 ntBASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 AC015911.4-201ENST00000588022 1070 ntBASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC65Q8IXS2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CCDC65Q8IXS2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms