Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 AP001269.4-201ENST00000609611 512 ntBASIC16.11■□□□□ 0.17
PACS2Q86VP3 AL031008.1-201ENST00000619963 541 ntBASIC16.11■□□□□ 0.17
PACS2Q86VP3 AL355877.3-201ENST00000622820 899 ntBASIC16.11■□□□□ 0.17
PACS2Q86VP3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.11■□□□□ 0.17
PACS2Q86VP3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 GGT3P-204ENST00000453783 1664 ntBASIC16.11■□□□□ 0.17
PACS2Q86VP3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.1■□□□□ 0.17
PACS2Q86VP3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 IGHV3-52-201ENST00000519770 353 ntBASIC16.1■□□□□ 0.17
PACS2Q86VP3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 TUBB8P12-201ENST00000308911 1335 ntBASIC16.1■□□□□ 0.17
PACS2Q86VP3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 TUBB7P-202ENST00000428444 1305 ntBASIC16.1■□□□□ 0.17
PACS2Q86VP3 TUBB8P7-204ENST00000567960 1332 ntBASIC16.1■□□□□ 0.17
PACS2Q86VP3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PACS2Q86VP3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PACS2Q86VP3 HSPA7-201ENST00000445535 1927 ntBASIC16.09■□□□□ 0.17
PACS2Q86VP3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 AC079781.3-201ENST00000449110 356 ntBASIC16.09■□□□□ 0.17
PACS2Q86VP3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.09■□□□□ 0.17
PACS2Q86VP3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms