Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 LINC02228-204ENST00000642115 2962 ntBASIC17.88■□□□□ 0.45
SHC4Q6S5L8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHC4Q6S5L8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.88■□□□□ 0.45
SHC4Q6S5L8 AC126365.1-201ENST00000578585 1514 ntBASIC17.88■□□□□ 0.45
SHC4Q6S5L8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 AL645939.2-201ENST00000427340 991 ntBASIC17.87■□□□□ 0.45
SHC4Q6S5L8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 AC003101.2-201ENST00000612557 442 ntBASIC17.87■□□□□ 0.45
SHC4Q6S5L8 AC009093.7-201ENST00000623853 1223 ntBASIC17.87■□□□□ 0.45
SHC4Q6S5L8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
SHC4Q6S5L8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 AL513477.1-201ENST00000602865 2407 ntBASIC17.86■□□□□ 0.45
SHC4Q6S5L8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 RN7SL828P-201ENST00000607615 303 ntBASIC17.86■□□□□ 0.45
SHC4Q6S5L8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 AC007967.4-201ENST00000614700 386 ntBASIC17.86■□□□□ 0.45
SHC4Q6S5L8 CICP24-201ENST00000605464 2705 ntBASIC17.86■□□□□ 0.45
SHC4Q6S5L8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SHC4Q6S5L8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms