Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.59■□□□□ 0.25
RFWD3Q6PCD5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD3Q6PCD5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD3Q6PCD5 MTHFR-217ENST00000641820 1569 ntBASIC16.59■□□□□ 0.25
RFWD3Q6PCD5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD3Q6PCD5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD3Q6PCD5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.59■□□□□ 0.25
RFWD3Q6PCD5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD3Q6PCD5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RFWD3Q6PCD5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RFWD3Q6PCD5 AL596087.1-201ENST00000400979 1969 ntBASIC16.58■□□□□ 0.25
RFWD3Q6PCD5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RFWD3Q6PCD5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
RFWD3Q6PCD5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RFWD3Q6PCD5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.58■□□□□ 0.25
RFWD3Q6PCD5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
RFWD3Q6PCD5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFWD3Q6PCD5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RFWD3Q6PCD5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RFWD3Q6PCD5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 RN7SL618P-201ENST00000477850 296 ntBASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 LINC02560-201ENST00000596379 459 ntBASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 AL033527.5-202ENST00000641632 1098 ntBASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 AC134407.2-201ENST00000625089 1978 ntBASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD3Q6PCD5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 BNIP3P1-202ENST00000550043 1585 ntBASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 SERBP1P5-201ENST00000510079 1181 ntBASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 AC044860.1-202ENST00000559481 777 ntBASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 AC138761.1-201ENST00000584393 385 ntBASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD3Q6PCD5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms