Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 AL022342.1-201ENST00000400363 863 ntBASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 MIR4492-201ENST00000581627 80 ntBASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 CYP2A7P1-201ENST00000595391 815 ntBASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 AC023141.13-201ENST00000604991 943 ntBASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 ACTL9-202ENST00000612068 1252 ntBASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 AC010507.1-201ENST00000633895 436 ntBASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 AL645728.2-201ENST00000641974 660 ntBASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 AC027612.1-201ENST00000445234 2395 ntBASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM53Q6P2H8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 IGLL3P-201ENST00000412472 434 ntBASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 AL031432.2-201ENST00000566714 459 ntBASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 AL928711.1-201ENST00000570165 459 ntBASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 FAM197Y3-203ENST00000618346 717 ntBASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 AC099521.3-201ENST00000624251 2938 ntBASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms