Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDCA8Q53HL2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 RN7SL752P-201ENST00000463779 287 ntBASIC21.74■■□□□ 1.07
CDCA8Q53HL2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDCA8Q53HL2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA8Q53HL2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms