Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC007551.1-201ENST00000457394 519 ntBASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 AC010491.1-201ENST00000563101 2797 ntBASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 GPR182-203ENST00000622922 591 ntBASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 MTHFR-217ENST00000641820 1569 ntBASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHROOM1Q2M3G4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 LINC02447-202ENST00000501888 2146 ntBASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 AC099398.1-201ENST00000567919 2776 ntBASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 RPL13AP25-201ENST00000484130 612 ntBASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 GAPDHP40-201ENST00000505218 1006 ntBASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 AP001582.1-201ENST00000525856 295 ntBASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHROOM1Q2M3G4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHROOM1Q2M3G4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms