Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.91■□□□□ 0.46
SREBF2Q12772 MIR3147-201ENST00000577811 66 ntBASIC17.91■□□□□ 0.46
SREBF2Q12772 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
SREBF2Q12772 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.91■□□□□ 0.46
SREBF2Q12772 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SREBF2Q12772 AC026740.1-201ENST00000607068 791 ntBASIC17.91■□□□□ 0.46
SREBF2Q12772 AP000346.4-201ENST00000614827 381 ntBASIC17.91■□□□□ 0.46
SREBF2Q12772 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.91■□□□□ 0.46
SREBF2Q12772 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SREBF2Q12772 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SREBF2Q12772 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SREBF2Q12772 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SREBF2Q12772 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.91■□□□□ 0.46
SREBF2Q12772 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.91■□□□□ 0.46
SREBF2Q12772 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SREBF2Q12772 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SREBF2Q12772 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SREBF2Q12772 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.9■□□□□ 0.46
SREBF2Q12772 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SREBF2Q12772 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.9■□□□□ 0.46
SREBF2Q12772 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.9■□□□□ 0.46
SREBF2Q12772 AL354877.1-201ENST00000424412 413 ntBASIC17.9■□□□□ 0.46
SREBF2Q12772 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.9■□□□□ 0.46
SREBF2Q12772 AC012618.1-201ENST00000461223 412 ntBASIC17.9■□□□□ 0.46
SREBF2Q12772 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.9■□□□□ 0.46
SREBF2Q12772 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.9■□□□□ 0.46
SREBF2Q12772 AC013355.1-201ENST00000562625 723 ntBASIC17.9■□□□□ 0.46
SREBF2Q12772 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.9■□□□□ 0.46
SREBF2Q12772 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.9■□□□□ 0.46
SREBF2Q12772 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.9■□□□□ 0.46
SREBF2Q12772 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.9■□□□□ 0.46
SREBF2Q12772 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SREBF2Q12772 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SREBF2Q12772 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.9■□□□□ 0.46
SREBF2Q12772 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.9■□□□□ 0.46
SREBF2Q12772 KRT8P29-201ENST00000420409 1371 ntBASIC17.9■□□□□ 0.46
SREBF2Q12772 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SREBF2Q12772 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SREBF2Q12772 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.89■□□□□ 0.46
SREBF2Q12772 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SREBF2Q12772 AC148477.4-201ENST00000613430 1793 ntBASIC17.89■□□□□ 0.45
SREBF2Q12772 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.89■□□□□ 0.45
SREBF2Q12772 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SREBF2Q12772 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 PP12613-201ENST00000424958 2230 ntBASIC17.89■□□□□ 0.45
SREBF2Q12772 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.89■□□□□ 0.45
SREBF2Q12772 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.89■□□□□ 0.45
SREBF2Q12772 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.89■□□□□ 0.45
SREBF2Q12772 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.89■□□□□ 0.45
SREBF2Q12772 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.89■□□□□ 0.45
SREBF2Q12772 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.89■□□□□ 0.45
SREBF2Q12772 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 AP001002.3-201ENST00000623482 206 ntBASIC17.89■□□□□ 0.45
SREBF2Q12772 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
SREBF2Q12772 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.89■□□□□ 0.45
SREBF2Q12772 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SREBF2Q12772 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
SREBF2Q12772 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.89■□□□□ 0.45
SREBF2Q12772 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SREBF2Q12772 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SREBF2Q12772 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SREBF2Q12772 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.89■□□□□ 0.45
SREBF2Q12772 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.88■□□□□ 0.45
SREBF2Q12772 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SREBF2Q12772 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SREBF2Q12772 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SREBF2Q12772 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SREBF2Q12772 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
SREBF2Q12772 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms