Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH1Q08174 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDH1Q08174 SSR4P1-203ENST00000599569 2260 ntBASIC15.33■□□□□ 0.04
PCDH1Q08174 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH1Q08174 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDH1Q08174 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH1Q08174 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH1Q08174 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDH1Q08174 AC090616.6-203ENST00000579186 1945 ntBASIC15.33■□□□□ 0.04
PCDH1Q08174 PAUPAR-201ENST00000630360 2965 ntBASIC15.33■□□□□ 0.04
PCDH1Q08174 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH1Q08174 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDH1Q08174 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDH1Q08174 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDH1Q08174 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDH1Q08174 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDH1Q08174 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
PCDH1Q08174 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDH1Q08174 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDH1Q08174 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 AZGP1P1-201ENST00000411909 902 ntBASIC15.32■□□□□ 0.04
PCDH1Q08174 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH1Q08174 AC004967.1-201ENST00000453589 447 ntBASIC15.32■□□□□ 0.04
PCDH1Q08174 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH1Q08174 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PCDH1Q08174 AC027612.4-201ENST00000605371 583 ntBASIC15.32■□□□□ 0.04
PCDH1Q08174 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDH1Q08174 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PCDH1Q08174 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH1Q08174 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDH1Q08174 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PCDH1Q08174 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PCDH1Q08174 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH1Q08174 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH1Q08174 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH1Q08174 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH1Q08174 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDH1Q08174 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
PCDH1Q08174 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
PCDH1Q08174 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDH1Q08174 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDH1Q08174 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PCDH1Q08174 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDH1Q08174 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDH1Q08174 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDH1Q08174 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDH1Q08174 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDH1Q08174 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDH1Q08174 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.31■□□□□ 0.04
PCDH1Q08174 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 AC069262.1-201ENST00000539058 672 ntBASIC15.31■□□□□ 0.04
PCDH1Q08174 AC015911.4-201ENST00000588022 1070 ntBASIC15.31■□□□□ 0.04
PCDH1Q08174 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 GPALPP1-207ENST00000611650 899 ntBASIC15.31■□□□□ 0.04
PCDH1Q08174 AC079781.4-201ENST00000641908 219 ntBASIC15.31■□□□□ 0.04
PCDH1Q08174 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDH1Q08174 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDH1Q08174 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms