Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 AC136621.1-201ENST00000624017 2304 ntBASIC13.88□□□□□ -0.19
HIST1H3AP68431 AC013268.4-201ENST00000637413 2228 ntBASIC13.88□□□□□ -0.19
HIST1H3AP68431 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.88□□□□□ -0.19
HIST1H3AP68431 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST1H3AP68431 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 AC092127.1-201ENST00000567093 3455 ntBASIC13.87□□□□□ -0.19
HIST1H3AP68431 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 AC087481.3-201ENST00000602886 1894 ntBASIC13.87□□□□□ -0.19
HIST1H3AP68431 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 KRT18P13-201ENST00000400056 1290 ntBASIC13.87□□□□□ -0.19
HIST1H3AP68431 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 AC069262.1-201ENST00000539058 672 ntBASIC13.87□□□□□ -0.19
HIST1H3AP68431 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 MIR6080-201ENST00000617359 66 ntBASIC13.87□□□□□ -0.19
HIST1H3AP68431 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 AC127383.1-201ENST00000444697 1800 ntBASIC13.87□□□□□ -0.19
HIST1H3AP68431 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.87□□□□□ -0.19
HIST1H3AP68431 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HIST1H3AP68431 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.86□□□□□ -0.19
HIST1H3AP68431 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HIST1H3AP68431 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HIST1H3AP68431 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.86□□□□□ -0.19
HIST1H3AP68431 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.86□□□□□ -0.19
HIST1H3AP68431 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST1H3AP68431 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST1H3AP68431 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.86□□□□□ -0.19
HIST1H3AP68431 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H3AP68431 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms