Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AL390955.2-201ENST00000603032 514 ntBASIC14.01□□□□□ -0.17
UBE2NP61088 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UBE2NP61088 AC134407.2-201ENST00000625089 1978 ntBASIC14.01□□□□□ -0.17
UBE2NP61088 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2NP61088 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2NP61088 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14□□□□□ -0.17
UBE2NP61088 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14□□□□□ -0.17
UBE2NP61088 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UBE2NP61088 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
UBE2NP61088 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14□□□□□ -0.17
UBE2NP61088 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14□□□□□ -0.17
UBE2NP61088 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
UBE2NP61088 AC087499.5-201ENST00000452760 1342 ntBASIC14□□□□□ -0.17
UBE2NP61088 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14□□□□□ -0.17
UBE2NP61088 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14□□□□□ -0.17
UBE2NP61088 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14□□□□□ -0.17
UBE2NP61088 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14□□□□□ -0.17
UBE2NP61088 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14□□□□□ -0.17
UBE2NP61088 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14□□□□□ -0.17
UBE2NP61088 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
UBE2NP61088 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14□□□□□ -0.17
UBE2NP61088 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14□□□□□ -0.17
UBE2NP61088 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14□□□□□ -0.17
UBE2NP61088 AL033527.5-202ENST00000641632 1098 ntBASIC14□□□□□ -0.17
UBE2NP61088 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14□□□□□ -0.17
UBE2NP61088 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14□□□□□ -0.17
UBE2NP61088 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
UBE2NP61088 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
UBE2NP61088 BNIP3P1-202ENST00000550043 1585 ntBASIC14□□□□□ -0.17
UBE2NP61088 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBE2NP61088 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
UBE2NP61088 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
UBE2NP61088 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2NP61088 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
UBE2NP61088 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2NP61088 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2NP61088 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2NP61088 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.99□□□□□ -0.17
UBE2NP61088 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.99□□□□□ -0.17
UBE2NP61088 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2NP61088 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2NP61088 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.99□□□□□ -0.17
UBE2NP61088 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms