Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MRPL20P1-201ENST00000400819 433 ntBASIC13.88□□□□□ -0.19
CLDN12P56749 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CLDN12P56749 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN12P56749 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.88□□□□□ -0.19
CLDN12P56749 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN12P56749 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.88□□□□□ -0.19
CLDN12P56749 REXO1L6P-202ENST00000619970 1078 ntBASIC13.88□□□□□ -0.19
CLDN12P56749 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CLDN12P56749 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN12P56749 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CLDN12P56749 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CLDN12P56749 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CLDN12P56749 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CLDN12P56749 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN12P56749 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN12P56749 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN12P56749 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CLDN12P56749 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN12P56749 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 CICP4-201ENST00000447359 2812 ntBASIC13.87□□□□□ -0.19
CLDN12P56749 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CLDN12P56749 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
CLDN12P56749 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CLDN12P56749 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CLDN12P56749 AKR1C7P-201ENST00000305623 895 ntBASIC13.87□□□□□ -0.19
CLDN12P56749 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CLDN12P56749 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.87□□□□□ -0.19
CLDN12P56749 PMS2P4-201ENST00000412466 1052 ntBASIC13.87□□□□□ -0.19
CLDN12P56749 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN12P56749 FAM185BP-201ENST00000443595 716 ntBASIC13.87□□□□□ -0.19
CLDN12P56749 AC245100.5-201ENST00000452108 331 ntBASIC13.87□□□□□ -0.19
CLDN12P56749 OR7E14P-202ENST00000530490 1290 ntBASIC13.87□□□□□ -0.19
CLDN12P56749 AL121772.3-201ENST00000610840 674 ntBASIC13.87□□□□□ -0.19
CLDN12P56749 AC004790.2-201ENST00000623588 572 ntBASIC13.87□□□□□ -0.19
CLDN12P56749 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN12P56749 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CLDN12P56749 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 AC007191.1-201ENST00000623179 2995 ntBASIC13.87□□□□□ -0.19
CLDN12P56749 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN12P56749 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CLDN12P56749 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN12P56749 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CLDN12P56749 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN12P56749 AC013726.1-201ENST00000563747 2285 ntBASIC13.87□□□□□ -0.19
CLDN12P56749 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN12P56749 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLDN12P56749 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN12P56749 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN12P56749 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms