Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN6P56747 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN6P56747 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
CLDN6P56747 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 AC106886.4-201ENST00000623557 2502 ntBASIC15.2■□□□□ 0.02
CLDN6P56747 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLDN6P56747 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN6P56747 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN6P56747 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN6P56747 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN6P56747 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.2■□□□□ 0.02
CLDN6P56747 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.19■□□□□ 0.02
CLDN6P56747 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN6P56747 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN6P56747 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 BAATP1-201ENST00000412284 1225 ntBASIC15.19■□□□□ 0.02
CLDN6P56747 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN6P56747 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN6P56747 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CLDN6P56747 RHOQP1-201ENST00000555758 579 ntBASIC15.19■□□□□ 0.02
CLDN6P56747 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN6P56747 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.19■□□□□ 0.02
CLDN6P56747 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN6P56747 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN6P56747 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLDN6P56747 LINC01144-201ENST00000626198 1710 ntBASIC15.19■□□□□ 0.02
CLDN6P56747 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CLDN6P56747 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLDN6P56747 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CLDN6P56747 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN6P56747 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN6P56747 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN6P56747 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CLDN6P56747 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 AC004987.2-201ENST00000395959 1148 ntBASIC15.18■□□□□ 0.02
CLDN6P56747 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN6P56747 AC016694.1-201ENST00000434179 700 ntBASIC15.18■□□□□ 0.02
CLDN6P56747 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.18■□□□□ 0.02
CLDN6P56747 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN6P56747 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN6P56747 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN6P56747 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN6P56747 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN6P56747 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN6P56747 KRT90P-201ENST00000549264 1064 ntBASIC15.18■□□□□ 0.02
CLDN6P56747 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN6P56747 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms