Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
SUMO3P55854 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
SUMO3P55854 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
SUMO3P55854 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 AC074338.1-201ENST00000416825 156 ntBASIC14.34□□□□□ -0.11
SUMO3P55854 AC093214.1-201ENST00000511688 1107 ntBASIC14.34□□□□□ -0.11
SUMO3P55854 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.34□□□□□ -0.11
SUMO3P55854 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SUMO3P55854 AC044860.1-202ENST00000559481 777 ntBASIC14.34□□□□□ -0.11
SUMO3P55854 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.34□□□□□ -0.11
SUMO3P55854 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.34□□□□□ -0.11
SUMO3P55854 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 AC005498.2-205ENST00000593218 784 ntBASIC14.34□□□□□ -0.11
SUMO3P55854 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.34□□□□□ -0.11
SUMO3P55854 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.34□□□□□ -0.11
SUMO3P55854 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SUMO3P55854 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.34□□□□□ -0.11
SUMO3P55854 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.34□□□□□ -0.11
SUMO3P55854 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SUMO3P55854 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.33□□□□□ -0.11
SUMO3P55854 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SUMO3P55854 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SUMO3P55854 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
SUMO3P55854 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.33□□□□□ -0.11
SUMO3P55854 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SUMO3P55854 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.33□□□□□ -0.12
SUMO3P55854 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.33□□□□□ -0.12
SUMO3P55854 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.33□□□□□ -0.12
SUMO3P55854 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.33□□□□□ -0.12
SUMO3P55854 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SUMO3P55854 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.33□□□□□ -0.12
SUMO3P55854 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.33□□□□□ -0.12
SUMO3P55854 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SUMO3P55854 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.33□□□□□ -0.12
SUMO3P55854 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.33□□□□□ -0.12
SUMO3P55854 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SUMO3P55854 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.33□□□□□ -0.12
SUMO3P55854 AC092337.1-201ENST00000568699 1129 ntBASIC14.33□□□□□ -0.12
SUMO3P55854 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.33□□□□□ -0.12
SUMO3P55854 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.33□□□□□ -0.12
SUMO3P55854 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.33□□□□□ -0.12
SUMO3P55854 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 AC127383.1-201ENST00000444697 1800 ntBASIC14.33□□□□□ -0.12
SUMO3P55854 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
SUMO3P55854 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.33□□□□□ -0.12
SUMO3P55854 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.33□□□□□ -0.12
SUMO3P55854 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 PRAL-201ENST00000624952 3286 ntBASIC14.33□□□□□ -0.12
SUMO3P55854 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SUMO3P55854 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 AC105917.1-201ENST00000506637 2539 ntBASIC14.33□□□□□ -0.12
SUMO3P55854 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SUMO3P55854 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.32□□□□□ -0.12
SUMO3P55854 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SUMO3P55854 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SUMO3P55854 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.32□□□□□ -0.12
SUMO3P55854 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms