Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
NUP98P52948 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.37■□□□□ 0.69
NUP98P52948 KRT8P13-201ENST00000463294 1010 ntBASIC19.37■□□□□ 0.69
NUP98P52948 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
NUP98P52948 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.37■□□□□ 0.69
NUP98P52948 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
NUP98P52948 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.37■□□□□ 0.69
NUP98P52948 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 PCDH8P1-201ENST00000428983 2773 ntBASIC19.37■□□□□ 0.69
NUP98P52948 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUP98P52948 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NUP98P52948 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NUP98P52948 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
NUP98P52948 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUP98P52948 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.36■□□□□ 0.69
NUP98P52948 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.36■□□□□ 0.69
NUP98P52948 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUP98P52948 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUP98P52948 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
NUP98P52948 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NUP98P52948 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.36■□□□□ 0.69
NUP98P52948 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.36■□□□□ 0.69
NUP98P52948 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.36■□□□□ 0.69
NUP98P52948 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.36■□□□□ 0.69
NUP98P52948 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.36■□□□□ 0.69
NUP98P52948 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.36■□□□□ 0.69
NUP98P52948 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.36■□□□□ 0.69
NUP98P52948 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
NUP98P52948 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.36■□□□□ 0.69
NUP98P52948 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
NUP98P52948 AC068587.10-201ENST00000641210 219 ntBASIC19.36■□□□□ 0.69
NUP98P52948 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUP98P52948 AC018735.1-201ENST00000437208 1502 ntBASIC19.36■□□□□ 0.69
NUP98P52948 AHCYP2-201ENST00000430630 1300 ntBASIC19.35■□□□□ 0.69
NUP98P52948 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.35■□□□□ 0.69
NUP98P52948 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NUP98P52948 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.35■□□□□ 0.69
NUP98P52948 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NUP98P52948 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.35■□□□□ 0.69
NUP98P52948 AC005730.2-201ENST00000564549 1184 ntBASIC19.35■□□□□ 0.69
NUP98P52948 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
NUP98P52948 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.35■□□□□ 0.69
NUP98P52948 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.35■□□□□ 0.69
NUP98P52948 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.35■□□□□ 0.69
NUP98P52948 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 AC007787.1-201ENST00000588095 1583 ntBASIC19.35■□□□□ 0.69
NUP98P52948 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NUP98P52948 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NUP98P52948 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NUP98P52948 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.35■□□□□ 0.69
NUP98P52948 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUP98P52948 AL645937.2-201ENST00000396808 931 ntBASIC19.35■□□□□ 0.69
NUP98P52948 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.35■□□□□ 0.69
NUP98P52948 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.35■□□□□ 0.69
NUP98P52948 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.35■□□□□ 0.69
NUP98P52948 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.35■□□□□ 0.69
NUP98P52948 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.35■□□□□ 0.69
NUP98P52948 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.35■□□□□ 0.69
NUP98P52948 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.34■□□□□ 0.69
NUP98P52948 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.34■□□□□ 0.69
NUP98P52948 AL023775.1-201ENST00000454907 1746 ntBASIC19.34■□□□□ 0.69
NUP98P52948 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.34■□□□□ 0.69
NUP98P52948 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
NUP98P52948 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.34■□□□□ 0.69
NUP98P52948 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.34■□□□□ 0.69
NUP98P52948 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 AC004945.1-201ENST00000416738 983 ntBASIC19.34■□□□□ 0.69
NUP98P52948 AL354877.1-201ENST00000424412 413 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms